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    "setup_admb",
    "stdEr",
    "write_dat",
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    {
      "page": "R2admb-package",
      "title": "ADMB to R interface functions",
      "topics": [
        "R2admb-package",
        "R2admb"
      ]
    },
    {
      "page": "admb_version",
      "title": "Query ADMB version",
      "topics": [
        "admb_version"
      ]
    },
    {
      "page": "AIC.admb",
      "title": "Standard accessor functions for ADMB model fits",
      "topics": [
        "AIC.admb",
        "coef.admb",
        "confint.admb",
        "deviance.admb",
        "logLik.admb",
        "print.admb",
        "print.summary.admb",
        "stdEr",
        "stdEr.admb",
        "summary.admb",
        "vcov.admb"
      ]
    },
    {
      "page": "compile_admb",
      "title": "Compile ADMB files, run, read output",
      "topics": [
        "compile_admb",
        "read_admb",
        "run_admb"
      ]
    },
    {
      "page": "do_admb",
      "title": "Compile and/or run an ADMB model, collect output",
      "topics": [
        "do_admb"
      ]
    },
    {
      "page": "extract_gradient",
      "title": "Extract gradients",
      "topics": [
        "extract_gradient"
      ]
    },
    {
      "page": "find_large_cor",
      "title": "Find large correlations",
      "topics": [
        "find_large_cor"
      ]
    },
    {
      "page": "mcmc.control",
      "title": "Control options for MCMC after ADMB fitting",
      "topics": [
        "mcmc.control"
      ]
    },
    {
      "page": "plot.admb_hist",
      "title": "Plot MCMC histogram",
      "topics": [
        "plot.admb_hist"
      ]
    },
    {
      "page": "read_pars",
      "title": "Read in parameters from an AD Model Builder run",
      "topics": [
        "read_pars",
        "read_psv",
        "read_rep"
      ]
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    {
      "page": "read_plt",
      "title": "Read in ADMB profile file",
      "topics": [
        "read_plt"
      ]
    },
    {
      "page": "run.control",
      "title": "set run options for running ADMB via R",
      "topics": [
        "run.control"
      ]
    },
    {
      "page": "setup_admb",
      "title": "Set up AD Model Builder environment variables",
      "topics": [
        "clean_admb",
        "setup_admb"
      ]
    },
    {
      "page": "write_pin",
      "title": "Write parameter and data files for ADMB",
      "topics": [
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        "write_dat",
        "write_pin"
      ]
    }
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      "modified": "2022-11-07 15:40:06",
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